Lecture plan

Revision as of 10:15, 8 August 2016 by Mblnr (talk | contribs) (Tentative lecture plan H2016)

Tentative lecture plan H2016

Tuesdays 10:15-12:00 in the Large Auditorium (2144) in the HIB Data building's 2nd floor (2. etg.). Relevant chapters and pages in the [[1]] are given for each lecture. Note the useful glossary in Appendix Two.

Lecture plan H2015
Date Topic Teacher Book chapters
23 Aug First gathering - about the course (you have to be there!) Rein & Nathalie Preface [1]
30 Aug Introduction: evolution and protein structure Rein [12]
6 Sep Databases Rein [2]
8-9 Sep PC lab: Databases Bojan + +
13 Sep Sequence alignment and scoring Rein [3; pp31-37; 41-50]
20 Sep Pairwise alignments with dynamic programming Rein [3; pp37-41]
27 Sep Sequence searches Rein [4]
29-30 Sep PC lab: Introduction to case/Sequence searches Bojan + +
4 Oct From genome to genes Michael 9
11 Oct Multiple sequence alignment Rein [5]
18 Oct No lecture
25 Oct Protein structure basics and structure-function relationship Nathalie 12
27-28 Oct PC lab: Multiple Sequence Alignments Bojan + +
1 Nov Protein Structure Visualization, Comparison and Classification Nathalie 13
8 Nov Protein secondary structure prediction Nathalie 14
15 Nov Protein tertiary structure prediction I Nathalie 15
17-18 Nov PC lab: Structures Bojan + +
22 Nov Protein tertiary structure prediction II Nathalie 15
29 Nov Systems bioinformatics Rein [Special text t.b.a. ]
6 Dec Q&A Rein, Nathalie
19 Dec Final Exam

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Teachers and Assistants

  • Nathalie Reuter, MBI/CBU (lecturer, course responsible)
  • Rein Aasland, MBI (lecturer)
  • Michael Dondrup, II/CBU (lecturer)
  • Bojan Kretnic, MBI/CBU (teaching assistant)